CDS

Accession Number TCMCG081C11858
gbkey CDS
Protein Id XP_002273638.1
Location join(20863439..20863704,20863782..20863905,20864023..20864238)
Gene LOC100256998
GeneID 100256998
Organism Vitis vinifera

Protein

Length 201aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002273602.4
Definition PREDICTED: casparian strip membrane protein 2 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category S
Description Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0007043        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009505        [VIEW IN EMBL-EBI]
GO:0009531        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0034329        [VIEW IN EMBL-EBI]
GO:0034330        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044426        [VIEW IN EMBL-EBI]
GO:0044462        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045216        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0048226        [VIEW IN EMBL-EBI]
GO:0051536        [VIEW IN EMBL-EBI]
GO:0051540        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGAGCACTGGTGAAGCAACAGCTATCAACATTGGGGAGACCAAGTCTGCTTCTGCTACTACCGTGGCCACCACAAAAGCTATCCAACATCCAAAAGCAGGATTGAAGAGAGGTCTTGCCATTTTCGACTTCATTCTCCGGCTCTCTGCCATTGGGGCTGCTTTGGCTGCCACTACCACTATGGGCACTACTGACCAGACTCTCCCTTTCTTTACTCAGTTCTTCCAGTTCCAAGCTAGCTACGATGATCTTCCCGCTTTCTCGTTTTTCGTGATTGCAAATGCTATAGCTAGTGGATACCTCTTCCTGTCCTTGCCCTTTTCCATAGTCTGCATCGTTCGGCCGCATGCCATGGGAGCAAGGCTCCTCCTAGTCATCTGTGACACTGTCATGGTTGCTCTCACCATAGCTGCTGCTGCCGCTGCTGCTGCCATAGTCTACTTAGCTCATAACGGGAATTCAAACGCCAACTGGGTGGCCATTTGTCAGCAATTCGATGACTTCTGCCAGAGTGTCAGTGGGGCCGTTGTGGCTTCCTTCATTGCAGCAGTCCTCTTCATGTTGATGATTGTCCTCTCAGCTTTCTCTCTGCGAAAGCATTGA
Protein:  
MKSTGEATAINIGETKSASATTVATTKAIQHPKAGLKRGLAIFDFILRLSAIGAALAATTTMGTTDQTLPFFTQFFQFQASYDDLPAFSFFVIANAIASGYLFLSLPFSIVCIVRPHAMGARLLLVICDTVMVALTIAAAAAAAAIVYLAHNGNSNANWVAICQQFDDFCQSVSGAVVASFIAAVLFMLMIVLSAFSLRKH